Insertion junction: CLIP2.057455_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057455
Chromosome:chromosome 17
Location:3740979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726400 (1 of 6) K04710 - ceramide synthetase (CERS) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGAAGCCCAGAACCCTCAGTTGGGCACCGCACCCCGTGACAGCGGCG
Internal bar code:GTCATCAATCCAGTGAGAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2181
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCTACGCGGCGTTGTAT
Suggested primer 2:GAGTGAGTGTGCAGTGAGCT