Insertion junction: CLIP2.057455_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057455
Chromosome:chromosome 17
Location:3740992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726400 (1 of 6) K04710 - ceramide synthetase (CERS) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTAGGAGTGGCCCCCGACAGGCACATGCGCTCCCTGCCGCAAGCATGA
Internal bar code:TATGCTGAGCAGTCCAAGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2447
LEAP-Seq percent confirming:91.8919
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGAGTGTGCAGTGAGCT
Suggested primer 2:CTACCTACGCGGCGTTGTAT