Insertion junction: CLIP2.057456_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057456
Chromosome:chromosome 6
Location:1212540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258400 (1 of 1) PF08737 - Rgp1 (Rgp1) 3'UTR
Cre06.g258450 (1 of 33) IPR013830 - SGNH hydrolase-type esterase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGGTCCCTGCTGCACCCCTGTGCACGTCACGAACGACAGGACCTTGAA
Internal bar code:GCTGGATTGATTGTTCCTTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:213
LEAP-Seq percent confirming:1.5873
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:62
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGCTTCATTGATGCGGG
Suggested primer 2:ATCACTTCCTTCAACGGCGT