Insertion junction: CLIP2.057462_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057462
Chromosome:chromosome 7
Location:3841254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338750 3'UTR
Cre07.g800823 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCTTCATGTGATCTAAGCTTTTAACGCATCATTGTCATCAATGCAAA
Internal bar code:ATGCTTTCTCGCAAGTAGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4328
LEAP-Seq percent confirming:76.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCTATGATGAGGCTCTT
Suggested primer 2:TTTGGCATGGGCATTCAAGC