Insertion junction: CLIP2.057473_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057473
Chromosome:chromosome 10
Location:917969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424150 TF2A4 (1 of 1) K03123 - transcription initiation factor TFIIA small subunit (TFIIA2, GTF2A2, TOA2); Transcription initiation factor IIA, gamma subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGTAACCAATACTGATACAGGCGGGGGCGCATGTATGCGTAAGTGAA
Internal bar code:AATGCGGAGCACAGGATGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1644
LEAP-Seq percent confirming:50.7042
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:ATAACATCCGCAAATGCCGC
Suggested primer 2:CCCCGTCCACACACAACATA