Insertion junction: CLIP2.057478_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057478
Chromosome:chromosome 5
Location:3630808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGTTTAAGGGGTTTTGCAGGGTTTGAAAAGTTTGACATGTCAGAAAT
Internal bar code:CCTTCATCCATGGAAAAAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3177
LEAP-Seq percent confirming:1.5873
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:62
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGGACAAGGGGAATGAG
Suggested primer 2:ACGTGTAAGGCTGAACGGTT