Insertion junction: CLIP2.057484_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057484
Chromosome:chromosome 12
Location:6993454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560750 (1 of 10) PF02536 - mTERF (mTERF) 3'UTR
Cre12.g560800 (1 of 2) K14664 - IAA-amino acid hydrolase [EC:3.5.1.-] (ILR1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCACGCGGACGTGCCCCGTAGGGTCCCAAGGCCAGCTACAACATCTTG
Internal bar code:TGATAAGATGGAATGAATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3452
LEAP-Seq percent confirming:98.3051
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCTGTATCCCCGAGTGT
Suggested primer 2:GAAGCGGATGAGGAGGATGG