Insertion junction: CLIP2.057485_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057485
Chromosome:chromosome 10
Location:6746677
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g467050 MOT48,DAP2,IDA10,DNAA14 (1 of 3) PF08190 - pre-RNA processing PIH1/Nop17 (PIH1); Inner Arm Dynein assembly factor 3'UTR
Cre10.g467100 (1 of 1) PTHR31633//PTHR31633:SF1 - FAMILY NOT NAMED // H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGGTCTACGCCTAGTCCAGCGAGGTATGCAACCCAGGTTCCAGTCCC
Internal bar code:GAGTACAGGGCCCGCACAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTTGCAACCTTCATGC
Suggested primer 2:TGTACGTGGGTTCTGAAGGC