Insertion junction: CLIP2.057489_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057489
Chromosome:plastome
Location:61843
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802289 ChreCp025,rps14,2716974 (1 of 1) K02954 - small subunit ribosomal protein S14 (RP-S14, MRPS14, rpsN); 30S ribosomal protein S14 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGAATGTTGCCCAGCAGAAATCGAAAATCAGTAATAAATATAAAAGA
Internal bar code:AGCGAATCACAAAGCATGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:311
LEAP-Seq percent confirming:42.4242
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACCTGTGTCCAACCAA
Suggested primer 2:GCGGTACCACTGCCACTAAT