Insertion junction: CLIP2.057499_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057499
Chromosome:plastome
Location:31036
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802279 rps8,2716952 30S ribosomal protein S8; (1 of 1) PTHR11758//PTHR11758:SF17 - 40S RIBOSOMAL PROTEIN S15A // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCACCAGAGGTACCAGAAATGTATTTACCTTTCCTCCCAAAAACACTT
Internal bar code:TTTGATAATTTCATCTCCAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:109
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCACGCCCATTTTTCAA
Suggested primer 2:TGCAGGAGTTTAACGAGCGT