Insertion junction: CLIP2.057504_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057504
Chromosome:chromosome 12
Location:7251475
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558800 (1 of 2) IPR000104//IPR017923 - Antifreeze protein, type I // Transcription factor IIS, N-terminal outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATCAGGGTCATCAACATTTGCACCTTGCGTCGCGTGTGTGAGATGTGA
Internal bar code:TTTAGAGATCACGTTAGGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:974
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGGGATGGGGTGGAAGG
Suggested primer 2:CGCGGCAGCCTTTGATTAAA