Insertion junction: CLIP2.057510_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057510
Chromosome:plastome
Location:171437
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802327 2716959,atpI,ChreCp062 ATPase IV subunit; (1 of 1) K02108 - F-type H+-transporting ATPase subunit a (ATPF0A, atpB) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTAATTCCCAGTAATAGTGCTGACCTACAGATACTTCAGCAATTTCTA
Internal bar code:TGGTCAATTCGTGGCGAACAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:208
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCAAACTGTGAGGCTG
Suggested primer 2:GCACCCGCTAAAGTTGCAAA