Insertion junction: CLIP2.057513_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057513
Chromosome:chromosome 7
Location:779127
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317950 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACGGACTAAGGATATAATTGGATAGGACGTCGAATGAGACGGGACAG
Internal bar code:CTTCACTGGCGGTGGACGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2545
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCCGTTTCCAAAAGGAC
Suggested primer 2:CAGGTATACGGTTCGTCGGG