Insertion junction: CLIP2.057515_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057515
Chromosome:chromosome 17
Location:4803839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g733350 3'UTR
Cre17.g733400 (1 of 4) PF13515 - Fusaric acid resistance protein-like (FUSC_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAGGGTTATGTACCGAATCTGCCGGATGTAGAAATACAGCGTTCCGC
Internal bar code:TTTCCAAGGTCAGTCTTGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1713
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGACATTCGACGCGTTGAGA
Suggested primer 2:GGCCTGCACTTAACCCTGAT