Insertion junction: CLIP2.057517_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057517
Chromosome:chromosome 8
Location:4338113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384650 ELI7,ELIP7 Early light-induced LHC-like protein; (1 of 6) PTHR14154//PTHR14154:SF5 - UPF0041 BRAIN PROTEIN 44-RELATED // EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGAACTGAGGTGGTGGCGTCAGACATGGTTGTGGTGCTGGTGAGCGC
Internal bar code:TTCAAATGGTACAGTCTTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2559
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGGTAGGGACAACGTCA
Suggested primer 2:ACCTGCAGTCGTTACACCTG