Insertion junction: CLIP2.057519_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057519
Chromosome:chromosome 17
Location:3940753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728000 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCCGCAATGGCCGCCCGCATTGGCCCGAGCCCACAGCAGCACGCATA
Internal bar code:GCATAAGAGCACGGCGACAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1737
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGTGAGTTGCTTGGTTG
Suggested primer 2:CGAATTGGGGGTAGCAAGGT