Insertion junction: CLIP2.057524_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057524
Chromosome:plastome
Location:5403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802264 petD,ChreCp002,2717021 cytochrome b6/f complex subunit 4; (1 of 1) K02637 - cytochrome b6-f complex subunit 4 (petD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGTTGCAATACGATTTGCAACCCTGAAGGGGGAAAACTGAGTTCTGT
Internal bar code:TTACATTCTCAGACTTTACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:117
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AAATAGGCAGTGGCGGTACC
Suggested primer 2:TAAAAACCAGGGCTTGCCCA