Insertion junction: CLIP2.057532_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057532
Chromosome:chromosome 17
Location:5606663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739900 (1 of 1) IPR012337//IPR027417 - Ribonuclease H-like domain // P-loop containing nucleoside triphosphate hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAGTTAACCCTCCGCACACTCAGCACATAGGGGTCCCAGGACGCCAC
Internal bar code:CCAGGGCAGGTCTTAAGAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2256
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACGTCAACACCTGCAG
Suggested primer 2:TTTGTCGGTGGTCTGGCTAC