Insertion junction: CLIP2.057533_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057533
Chromosome:chromosome 9
Location:3406557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395732 (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTCACCACGTCCTACGCCACGAATCCGACCTGCCCCTGACCCGGCGT
Internal bar code:TATGCGAGCATTTTGCGTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1324
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATTCGACTCGCTCGGAA
Suggested primer 2:AGAATGCCTGTAGCCACACC