Insertion junction: CLIP2.057542_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057542
Chromosome:chromosome 12
Location:7884168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g553500 ANK15 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGTATACGCGTGTCTTGGGTGTGGCATGTGGGTCGCACACAGCAAAC
Internal bar code:GGATTGTCTATGGGAGAACTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2085
LEAP-Seq percent confirming:92.4528
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCGACTGTTCAAAACCC
Suggested primer 2:TGGCTGTGGAGCTGAAGATG