Insertion junction: CLIP2.057545_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057545
Chromosome:chromosome 10
Location:2565749
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g436500 XPP SurE-like phosphatase/nucleotidase; (1 of 1) PTHR30457:SF0 - 5'/3'-NUCLEOTIDASE SURE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGTCCGCTCCGCCACCTCGCACCTTGCATGCCGCCTCGCGCGCCGCG
Internal bar code:TGAAGCCTCTGTTTTCGAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:287
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACGGGGATCCCAGTTCT
Suggested primer 2:AGGTGTGTGTGTGTGTGTGT