Insertion junction: CLIP2.057553_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057553
Chromosome:chromosome 9
Location:2014221
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g396750 CSE18 Predicted protein of CSE family; (1 of 1) IPR000601//IPR022409 - PKD domain // PKD/Chitinase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGCAGCGTGCTTCATGGAATGAGATACAACCATGTGTGCGGCGCGCG
Internal bar code:TAATGTGGTACCGGCCCCGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:451
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACAGGTGTTCGTGCAGG
Suggested primer 2:ACTGCCAAGCATTCTCACGA