Insertion junction: CLIP2.057557_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057557
Chromosome:chromosome 9
Location:4917527
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g403182 SPT6 (1 of 1) K11292 - transcription elongation factor SPT6 (SUPT6H, SPT6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGTGGGGCGGGGGAGGGTTTAAATTGGTCGGACGATGATTATGGAT
Internal bar code:CCAGAGGATATGCACATTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:89
LEAP-Seq percent confirming:27.027
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTTGACAACACACGCAG
Suggested primer 2:CACACACACACACATGCTGG