Insertion junction: CLIP2.057561_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057561
Chromosome:chromosome 17
Location:339277
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g698233 (1 of 3) PF00651//PF03110 - BTB/POZ domain (BTB) // SBP domain (SBP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGGGAGGGTGAGGGGGGTGAGGTGGGGTAGTGTCATATAACCCTGA
Internal bar code:TTTTGGGCTCTGTATGCACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2066
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACATCCTTCCTCGCT
Suggested primer 2:CTGGTTCAAGCATCGCAAGG