Insertion junction: CLIP2.057567_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057567
Chromosome:chromosome 10
Location:3041011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440900 RRP43 Rrp42-like exosome component; (1 of 1) K12586 - exosome complex component RRP43 (RRP43, EXOSC8, OIP2) 3'UTR
Cre10.g440950 FAP192 (1 of 1) PTHR14465//PTHR14465:SF0 - IQ DOMAIN-CONTAINING PROTEIN H // IQ DOMAIN-CONTAINING PROTEIN H; Flagellar Associated Protein 192 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGACGAATTCGGTGCACCAGACCGTGAATCCATGATACAAATGAAGAG
Internal bar code:GGGGGTTCCGTTCGAAGATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:590
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCGTCATCTTCAACCTG
Suggested primer 2:CAGCTGCAGGGTCTGTACAA