Insertion junction: CLIP2.057569_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057569
Chromosome:chromosome 9
Location:2283074
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g394700 RNZ1 (1 of 6) 3.1.26.11 - Ribonuclease Z / tRNase Z; Ribonuclease Z intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCATCACCAAACACACAACGCGCGAACACACACCATGTGTGCGCGCGT
Internal bar code:TTTAAAGCGCTTTAGATTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:308
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCAACTCCACACTTCGC
Suggested primer 2:TGCACCACCACCGTTATCTC