Insertion junction: CLIP2.057570_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057570
Chromosome:chromosome 12
Location:302230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485550 (1 of 1) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGAGTTATGAGATCAAAGTGTCTGCGGGATACAGCATGTGTGTATGCA
Internal bar code:GAAATACTAACTATAACTAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1873
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AATCGCACTGCCCAATCTCA
Suggested primer 2:CCAACATCATCGCAGCCATG