Insertion junction: CLIP2.057570_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057570
Chromosome:chromosome 12
Location:302245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485550 (1 of 1) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCAAGGACATGCGCACACACTTTGTAAGCCAGGTGCAAACACACGCG
Internal bar code:GAAATACTAACTATAACTAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:976
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACATCATCGCAGCCATG
Suggested primer 2:AATCGCACTGCCCAATCTCA