Insertion junction: CLIP2.057579_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057579
Chromosome:chromosome 16
Location:7723699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686622 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTACATCAACTCTAGCCCCAACACCTCAAACGTTGCGTGTAATGCCTC
Internal bar code:ACATCCGCGGTGAGGCAGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1650
LEAP-Seq percent confirming:92.0635
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGACAGGTGGTTCCAGTG
Suggested primer 2:GTATCAGCACTCGCGCAAAG