Insertion junction: CLIP2.057581_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057581
Chromosome:chromosome 16
Location:5870682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679500 NUOB8 (1 of 1) K03946 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 (NDUFA2); NADH:ubiquinone oxidoreductase 11 kDa subunit 3'UTR
Cre16.g679550 FAP277 Flagellar Associated Protein 277; (1 of 1) K13963 - serpin B (SERPINB) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAATTCCAAAGTGGCGTACACTCGAACCTCGGAAGCCAGACTCAAATCT
Internal bar code:GTGCGTTTGTGCTGCAGATATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1894
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATTCAAGCAGCTCTTCC
Suggested primer 2:ATGGTCCTTCAGCCCTCTCT