Insertion junction: CLIP2.057585_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057585
Chromosome:chromosome 17
Location:723256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g700800 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCACCTCGCACACTGCCCTTCATTCCCCTTGCCTCCCCAAGCCCCTG
Internal bar code:CGGCCTACCCGTGGTCCGCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2067
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCGTCCACGTGACATTC
Suggested primer 2:CCAAACCTTAGGGTCCCGAC