Insertion junction: CLIP2.057595_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057595
Chromosome:chromosome 16
Location:4494835
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g667700 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGGGGAGGGTGTGGAGGCAGCGGTGAGGCTACCGCCACCGCCATCTC
Internal bar code:GTTTAAACGTACTGAGTTAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:282
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGTTTCTTGGGACTGGA
Suggested primer 2:GTTAGGGTGGGTGTGTGGAG