Insertion junction: CLIP2.057597_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057597
Chromosome:chromosome 15
Location:2871883
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre15.g801775 (1 of 1) IPR000477//IPR013019 - Reverse transcriptase domain // MAD homology, MH1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCCTGGCCGGCCTGGTGCTGTCGCTCAACAAGTGCAAGTTCGGCAC
Internal bar code:GTCCCCGGGGGATAGAGACTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:870
LEAP-Seq percent confirming:19.4444
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGCTCGTGATAGCCTCC
Suggested primer 2:CAGAGCTGCAGCAAGTGTTG