Insertion junction: CLIP2.057598_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057598
Chromosome:chromosome 3
Location:1678144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153050 RWP1 (1 of 1) IPR000104//IPR003035 - Antifreeze protein, type I // RWP-RK domain; RWP-RK transcription factor 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAATGCAATCGCGGGACTGGCCAGTCCCCACTTCGCAAAAAACAAAGC
Internal bar code:CGAGTATCGGTTAAGATAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2498
LEAP-Seq percent confirming:86.7924
LEAP-Seq n confirming:138
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:159

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAAATATCAGCCCGCTCT
Suggested primer 2:GCAATAAACCGTCGAAGGCC