Insertion junction: CLIP2.057602_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057602
Chromosome:plastome
Location:127496
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802316 ChreCp052,2717043,ycf10,cemA (1 of 1) PTHR33650:SF2 - CHLOROPLAST ENVELOPE MEMBRANE PROTEIN; heme-binding protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGATATTTCAAAAATTTATCAAGAAAAAACTATAGAATTAGCAACAT
Internal bar code:TCTATTTAGTTCAAGCGGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:224
LEAP-Seq percent confirming:6.12245
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCAGTACCTTGACCCAT
Suggested primer 2:AGCCATCACCAAACTCATCGT