Insertion junction: CLIP2.057607_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057607
Chromosome:chromosome 1
Location:3092266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019650 3'UTR
Cre01.g019700 PAP7 Class-II RNA nucleotidyl transferase 7; (1 of 12) 2.7.7.19 - Polynucleotide adenylyltransferase / RNA adenylating enzyme 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCTCGCGTGTGTGACTCCTGGCTAGCAAGTCATTGTGAGGACATCCT
Internal bar code:GTAGGGGTATGCTCATGCTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1508
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTAATCATGCGCCGTTGGTC
Suggested primer 2:GGGAATCTAGGTGTGTGGCC