Insertion junction: CLIP2.057608_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057608
Chromosome:chromosome 13
Location:970898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568200 AXL1 Arabinose chain extension enzyme like protein 1; (1 of 3) PTHR10994//PTHR10994:SF69 - RETICULON // PROLINE-RICH PROTEIN 18 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGTAAACTTGCACAACACACAGGCGCTCTCCCCCACAGGCCTTCCGC
Internal bar code:CGCTTAATGTACCACATGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1226
LEAP-Seq percent confirming:87.7551
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTCCTTGAGTGTGGGGC
Suggested primer 2:AGGTTTGTGTGGGCAAGTCA