Insertion junction: CLIP2.057613_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057613
Chromosome:chromosome 6
Location:6271049
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g292450 PUS13 RNA pseudouridine synthase; (1 of 1) 5.4.99.44 - Mitochondrial tRNA pseudouridine(27/28) synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGCTGTGTGCTGATGCGGTGTGCTGGGTAATGGTGCTGGGCAGTGG
Internal bar code:CAATTACAGATTATGTTGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:138
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAAGACCTGAAGCCGAA
Suggested primer 2:CGGTTTGTCAAAGCCTTGGG