Insertion junction: CLIP2.057616_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057616
Chromosome:chromosome 12
Location:347069
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g495850 HBD1 (1 of 1) PTHR24322//PTHR24322:SF513 - FAMILY NOT NAMED // PROTEIN DHS-2, ISOFORM A; 3-hydroxybutyrate dehydrogenase intron
Cre12.g801342 (1 of 1) IPR009714 - Resistin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGTCCCAGTGGGATGTGCAAGTCAATGTTTCGACGTCCTTGTCAATG
Internal bar code:TACTAAAGTTACCCTTGGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:342
LEAP-Seq percent confirming:2.63158
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTGAGGTTGCAGAGGAG
Suggested primer 2:GATTGATGTCATGGCGCCAC