Insertion junction: CLIP2.057625_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057625
Chromosome:chromosome 17
Location:5601710
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g739850 LRRC6,Seahorse,DNAAF11,MOT47 (1 of 8) PF14580 - Leucine-rich repeat (LRR_9); Leucine-rich repeat-containing protein 6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGCGCCCAACGGAGCCTGACGGGGTCCCGGCCCTCTTCCCACCCTCC
Internal bar code:AATGTACTCGAGTGGTGCACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:3.7037
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCATATCGCCGTACTGCTGT
Suggested primer 2:CCCCCATCCCCTCTCACTTA