Insertion junction: CLIP2.057628_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057628
Chromosome:chromosome 12
Location:4302461
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g518650 BSD1,BHSD1 (1 of 2) K07748 - sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) (E1.1.1.170, NSDHL, ERG26); 3-beta hydroxysteroid dehydrogenase 3'UTR
Cre12.g518700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGCACAGTTCACGAGTACGATGTGCCTGCTATAAGGGTTGAAGCACG
Internal bar code:CGTGCCCGGGGAAGATCGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1319
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCTTCTTGCTACATGTC
Suggested primer 2:CAGCATGAAGGACGCGATTG