Insertion junction: CLIP2.057631_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057631
Chromosome:chromosome 2
Location:1028360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080050 (1 of 2) PF00645 - Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region (zf-PARP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCAGGGCCCCTATCTTAATGTCTCCAGACATTATTCGGCCATTTTGG
Internal bar code:AGGCCTCGACTAGGTTAAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3675
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:265
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:270

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGGGTCTGGAAATACGC
Suggested primer 2:TTGGTTTGCTGCATGTGTCG