Insertion junction: CLIP2.057641_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057641
Chromosome:chromosome 9
Location:6645236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416450 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACGAGGCAGGAAGGCACGAAAGATCGTACGCACCACCTCGTACGCAC
Internal bar code:TAATAATAATGTAGGTGCGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1963
LEAP-Seq percent confirming:92.7835
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGAGCGCAGGTTAATTG
Suggested primer 2:GGAAACGGTACATGCGCATC