Insertion junction: CLIP2.057645_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057645
Chromosome:chromosome 3
Location:6823964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197350 CDC5 (1 of 1) K12860 - pre-mRNA-splicing factor CDC5/CEF1 (CDC5L, CDC5, CEF1); Cell Division Cycle 5 5'UTR
Cre03.g197400 SLP1,SEL1 (1 of 1) K14026 - SEL1 protein (SEL1, SEL1L); Sel-1 like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGAAATCGCCGGTTGTGCCCCATCTTCATGTACTTTGAACCAAAGCAA
Internal bar code:AACGGTGTTATCGGGTCCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2601
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGGTCCGTCATACAGCC
Suggested primer 2:ACCTACCAGAAACGCCTTGG