Insertion junction: CLIP2.057649_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057649
Chromosome:chromosome 13
Location:62482
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562200 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR
Cre13.g562250 FAP92 Flagellar Associated Protein 92; (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATATGCTATTGACGAGTGTTGCGGAATGGCTGTGCATACTGGCGCGCCA
Internal bar code:CGAGACTGTCGCCCCATTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2372
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCAGATGCTGATGCGTG
Suggested primer 2:TCACCGCTTGTACATGTGCT