Insertion junction: CLIP2.057656_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057656
Chromosome:chromosome 14
Location:3019608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627750 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCAGCCCGCATGCGTAGATGTGGGTGGCGGCCAAGCGGGTGGGCTGC
Internal bar code:CGACAAAGTAGGTGCTGTGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3562
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCACGAGAAACACACGG
Suggested primer 2:GCAGTAGCACCAATCGGGAT