Insertion junction: CLIP2.057657_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057657
Chromosome:chromosome 11
Location:3591639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478050 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGGGTGTGGCCAGGGTGTGTGTGTGTCACGTGTTGTGTCACTTGGTA
Internal bar code:TCTGTTATTTGTGTTAGCATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1647
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCTTGAACTTTCGGCC
Suggested primer 2:AGCTAAAACGAGTGTGGGGG