Insertion junction: CLIP2.057662_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057662
Chromosome:chromosome 2
Location:4657332
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g107650 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGAATGACTCTTGCACCACAGGCTCCTGTCAGTCCTGTGAGCAGGAAC
Internal bar code:CGTGTAATGGGGTTAATGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4035
LEAP-Seq percent confirming:28.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGCAACGCTGAAGAAA
Suggested primer 2:CAGTTCAGTCGGACACGTCA