Insertion junction: CLIP2.057676_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057676
Chromosome:chromosome 17
Location:6609866
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745497 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGTTGTTGTTGTTGTTGTGCCGCAGGGGCCCGCCCTTCCCTGGTGCC
Internal bar code:TTTCCTGTCTTTGTTCGTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2501
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGGGGCCATCAATGATT
Suggested primer 2:AGCATCTGTGTCGCACTTGA