Insertion junction: CLIP2.057686_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057686
Chromosome:chromosome 5
Location:990447
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g247150 (1 of 71) IPR016181 - Acyl-CoA N-acyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCTTCCTGCACCCTCCACACACACACACGCCAGGCTGGTGTGGGGCG
Internal bar code:CTTGATTGCGAATGTAATATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:388
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGAGTCCACCACATGAA
Suggested primer 2:ATTGGACGTGTGGGCTGTAG